\section{File List}
Here is a list of all files with brief descriptions:\begin{DoxyCompactList}
\item\contentsline{section}{include/\hyperlink{_cache_8h}{Cache.h} (Manages caching of particles to file )}{\pageref{_cache_8h}}{}
\item\contentsline{section}{include/\hyperlink{_cache_item_8h}{CacheItem.h} (Hold an item (fluid, rbd or boundary) that will be written to disk as a single file )}{\pageref{_cache_item_8h}}{}
\item\contentsline{section}{include/\hyperlink{_capsule_8h}{Capsule.h} (\hyperlink{class_capsule}{Capsule} rigid body )}{\pageref{_capsule_8h}}{}
\item\contentsline{section}{include/\hyperlink{_configuration_8h}{Configuration.h} (Parses xml config file )}{\pageref{_configuration_8h}}{}
\item\contentsline{section}{include/\hyperlink{_environment_8h}{Environment.h} (Manages interaction between rigid bodies and boundary and fluids )}{\pageref{_environment_8h}}{}
\item\contentsline{section}{include/\hyperlink{_fluid_particle_8h}{FluidParticle.h} (Basic unit of the lagrangian simulation )}{\pageref{_fluid_particle_8h}}{}
\item\contentsline{section}{include/\hyperlink{_integration_8h}{Integration.h} (Manages the integration of acceleration using 2 basic methods )}{\pageref{_integration_8h}}{}
\item\contentsline{section}{include/\hyperlink{_main_app_8h}{MainApp.h} (Main gui application window, modified from JMacey's demo )}{\pageref{_main_app_8h}}{}
\item\contentsline{section}{include/\hyperlink{_neighbour_8h}{Neighbour.h} (Handles spatial hashing and neighbour search )}{\pageref{_neighbour_8h}}{}
\item\contentsline{section}{include/\hyperlink{_particle_8h}{Particle.h} (Base unit of this lagrangian simulation )}{\pageref{_particle_8h}}{}
\item\contentsline{section}{include/\hyperlink{_shader_library_8h}{ShaderLibrary.h} (Manages creation and use of shaders )}{\pageref{_shader_library_8h}}{}
\item\contentsline{section}{include/\hyperlink{_shader_object_8h}{ShaderObject.h} (Unit shader object, keeping data about shaders read from the config file )}{\pageref{_shader_object_8h}}{}
\item\contentsline{section}{include/\hyperlink{_simulation_8h}{Simulation.h} (Manages the simulation and communication to and from the gui )}{\pageref{_simulation_8h}}{}
\item\contentsline{section}{include/\hyperlink{_solver_8h}{Solver.h} (Main class that manages the SPH simulation )}{\pageref{_solver_8h}}{}
\item\contentsline{section}{src/\hyperlink{_cache_8cpp}{Cache.cpp} (Stores and export positions of fluid and rbd to file )}{\pageref{_cache_8cpp}}{}
\item\contentsline{section}{src/\hyperlink{_cache_item_8cpp}{CacheItem.cpp} (Unit storage of the main cache structure, that holds positions of particles )}{\pageref{_cache_item_8cpp}}{}
\item\contentsline{section}{src/\hyperlink{_capsule_8cpp}{Capsule.cpp} (Represent a capsule rigid body )}{\pageref{_capsule_8cpp}}{}
\item\contentsline{section}{src/\hyperlink{_configuration_8cpp}{Configuration.cpp} (Static class, read the xml config file and initialises all the the objects and managers used in the flocking system )}{\pageref{_configuration_8cpp}}{}
\item\contentsline{section}{src/\hyperlink{_environment_8cpp}{Environment.cpp} (Master class that oversees the creation of the boundary and rigid bodies and manages their interaction with the fluids )}{\pageref{_environment_8cpp}}{}
\item\contentsline{section}{src/\hyperlink{_fluid_particle_8cpp}{FluidParticle.cpp} }{\pageref{_fluid_particle_8cpp}}{}
\item\contentsline{section}{src/\hyperlink{_integration_8cpp}{Integration.cpp} (Performs integration of acceleration to get next velocity and position )}{\pageref{_integration_8cpp}}{}
\item\contentsline{section}{src/\hyperlink{main_8cpp}{main.cpp} }{\pageref{main_8cpp}}{}
\item\contentsline{section}{src/\hyperlink{_main_app_8cpp}{MainApp.cpp} (Main gui application class, extended from the MainWindow\_\-ui and holds all the UI and our main gl window )}{\pageref{_main_app_8cpp}}{}
\item\contentsline{section}{src/\hyperlink{_neighbour_8cpp}{Neighbour.cpp} (Performs the spatial hashing and neighbour search )}{\pageref{_neighbour_8cpp}}{}
\item\contentsline{section}{src/\hyperlink{_particle_8cpp}{Particle.cpp} (Parent class that represents a particle in space and used to represent all entities, such as the fluid particle and rbd )}{\pageref{_particle_8cpp}}{}
\item\contentsline{section}{src/\hyperlink{_shader_library_8cpp}{ShaderLibrary.cpp} (Higher level and easier access to ngl ShaderManager allows group actions on many shaders at a time, such as updating matrices from camera change )}{\pageref{_shader_library_8cpp}}{}
\item\contentsline{section}{src/\hyperlink{_shader_object_8cpp}{ShaderObject.cpp} (Store basic info about shader files, read from the config file )}{\pageref{_shader_object_8cpp}}{}
\item\contentsline{section}{src/\hyperlink{_simulation_8cpp}{Simulation.cpp} (Parent class that creates all other objects for the simulation and manages interaction with the gui )}{\pageref{_simulation_8cpp}}{}
\item\contentsline{section}{src/\hyperlink{_solver_8cpp}{Solver.cpp} (Main class that performs the fluid simulation and visualisation )}{\pageref{_solver_8cpp}}{}
\end{DoxyCompactList}
